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Re: write.asciigrid: msg#00016lang.r.geo
On Tue, 9 May 2006, Zev Ross wrote: > Hi Roger and Andy, > > Thanks for the help. I'm using ArcGIS 9.1. writeGDAL works as promised. > The one odd behavior was the initial display in ArcGIS once I first added > the two bands. Using the "stretched" classification, the map initially > looked all black. Under properties, I changed the symbology to > "Classified" and it looked fine -- then I changed back to "Stretched" and > again it looked fine. Quirky behavior like this from ArcGIS is nothing > new. Did you do the: ArcToolbox | Data Management Tools | Raster | Calculate Statistics trick too? I think that is what Arc (sometimes) does on the fly when changing symbology (dreadful term!). But when NAs are present, it can get stuck. > > I tried the suggested write ascii command from maptools on my own data > set and it didn't work initially due to the fact that my grid cells > apparently are not perfect squares (perhaps this is a rounding issue). No > need to keep fiddling with that, though, as writeGDAL does the trick. > Thanks again, > Yes, they need to be equal for the Arc ASCII grid route to work. If they are, it works (when the decimal point in FLOAT is correct too). Roger > Zev > > Roger Bivand wrote: > > On Thu, 4 May 2006, Zev Ross wrote: > > > > Hi All, > > I'd like to write the results of a kriging call to an ascii grid using > GSTAT -- but I would like to write BOTH the predictions and the variances > to grids. Is there a more elegant (and less dangerous) way to do it than > what I have below? > > > > Dangerous for whom? Elegant, would be nice but life is short? The answer > depends on the software that is going to read the output grids, and how it > treats locales, etc., since both predictions and variances will be > floating point. > > > > depth_uk <- krige(DEPTH~slope.asc, depth, slope, vgm_depth_r) > > # write the predictions > > write.asciigrid(depth_uk "c:/junk/rk/predictions.asc") > > # replace predictions with variances and then write the variances > > depth_uk$var1.pred<-depth_uk$var1.var > write.asciigrid(depth_uk, "c:/junk/rk/.asc") > > > > If the software on the other side reads GeoTiff, my preference would be: > > library(rgdal) > writeGDAL(depth_uk, "depth_uk.tif") > > which I have seen work with ENVI, but not with ArcGIS 9.1; this preserves > coordinate reference system metadata if set. > > In a forthcoming release of rgdal, you should be able to pass options= to > writeGDAL() - specifically INTERLEAVE=PIXEL, see: > > http://grass.itc.it/grass61/manuals/html61_user/r.out.gdal.html > > and I have seen this help with ArcGIS 9.1, although it wasn't predictable > (the legend scale showed correct values but the visualisation was wrong > sometimes - I tried on a Wednesday if that helps!). ArcGIS only accepted > single band GeoTiff files, it thought 3-band were coloured images. ENVI > simply read the GDAL-generated GeoTiffs (with 4 bands in the case we > tried - point pattern kernel densities at different bandwidths) correctly > without making any assumptions. > > Depending on your locales, the ASCII grid route is being maintained in the > maptools package and functions in the sp package will be deprecated. So > > library(maptools) > writeAsciiGrid(depth_uk, "preds.txt", attr="var1.pred", dec=<your choice>) > writeAsciiGrid(depth_uk, "vars.txt", attr="var1.var", dec=<your choice>) > > should get the values into ArcGIS 9.1 through the Toolbox (it is very > sensitive to the "."/"," dec= setting). [The intention is to gather > input/output functions in maptools and rgdal, freeing the other packages > from having often older, duplicate copies of functions that do not get > maintained.] > > Again, how to do it does depend on what software is going to read the > output ASCII grids, and what assumptions (often undocumented) it makes > about the files. > > Please let us know how you get on, > > Roger > > > > PS this sample code comes from Tomislav Hengl's page > (http://spatial-analyst.net/regkriging.php) > > > > Nice link! > > > > Zev > -- > Zev Ross > ZevRoss Spatial Analysis > 303 Fairmount Ave > Ithaca, NY 14850 > (607) 277-0004 (phone) > (866) 877-3690 (fax toll-free) > zev@xxxxxxxxxxx > www.zevross.com > > > > > > -- > Zev Ross > ZevRoss Spatial Analysis > 303 Fairmount Ave > Ithaca, NY 14850 > (607) 277-0004 (phone) > (866) 877-3690 (fax toll-free) > zev@xxxxxxxxxxx > www.zevross.com > > -- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Administration, Helleveien 30, N-5045 Bergen, Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43 e-mail: Roger.Bivand@xxxxxx
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