On Thursday, March 27, 2003, at 04:15 AM, Heikki Lehvaslaiho wrote:
In related note: I wanted to inherit directly from a non-bioperl class
and merge it with the rest of bioperl and came up with this:
package Bio::WebAgent;
use vars qw(@ISA);
use strict;
use LWP::UserAgent;
use Bio::Root::Root;
@ISA = qw(LWP::UserAgent Bio::Root::Root);
sub new {
my $class = shift;
my $self = $class->SUPER::new();
while( @_ ) {
my $key = shift;
$key =~ s/^-//;
$self->$key(shift);
}
return $self; # success - we hope!
}
This actually faster than using _rearrange. In some of my tests old_new
versus new_new was 19:14 seconds, sometimes less.
Can anyone point out why this would be bad and perhaps show me a better
way of doing the same thing.
Well, you don't pass on any parameters, so you rely on every class down
the tree having a method named identically to the parameter.
Would be nice if that were the case, but in bioperl it's definitely
not...
-hilmar
-Heikki
On Thu, 2003-03-27 at 11:32, Matthew Pocock wrote:
argument list intact. Also, parameters may be used
in more than one
level in the hierarchy.
-hilmar
That seems a little rude. Can we get around this a bit
by accessing the parameter via an accessor? e.g.
my $self = my_super->new(@_);
// pigColor was an argument but I need to know it to
// set myself up - use an accessor
my $pigColor = $self->pigColor();
Matthew
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_/ _/ _/ Heikki Lehvaslaiho heikki@xxxxxxxxx
_/_/_/_/_/ EMBL Outstation, European Bioinformatics Institute
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Hilmar Lapp email: lapp at gnf.org
GNF, San Diego, Ca. 92121 phone: +1-858-812-1757
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