Subject: Complex object length quantification - msg#00172
List: java.imagej
Happy holiday to everyone,
I am trying to measure the number of and individual lengths of spikes
growing out of a central bead (sphere). In particular, I would like to
draw 3 progressively larger circles (100 microns, 200 microns, and 300
microns in diamenter) around the bead and have ImageJ count the number
of points crossing a particular circle. This way we could see the
number of spikes crossing the 100 or 200 or 300 micron circles to
determine how many spokes are larger than 300 microns, 200-300 microns,
and finally 100-200 microns in length. Finally, I would like the data
to be dumped into an excel spreadsheet.
Assumptions:
1) all spokes radiate from the central bead.
2) the bead can be photographed so that it is in the center of the
field.
3) one bead per image
Note: if it makes life significantly easier, I can take flouresent
images so that the contrast is significantly improved and the program
may be able to identify "spokes" more easily.
Thanks to everyone for their help
Anil
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Re: Java on Win XP 64bit
I just tried to start ImageJ on a Windows XP 64bit system,
but an error message "Could not create the Java Virtual
Machine" appears. So I downloaded the 64bit version of Java
2 SDK 1.4.2_10, but there appears another error message
"Installation package is not supported by this processor
type". Processor is a Dual Pentium D 3,2 GHz. Do you have
any suggestions how to solve this problem?
Which Windows version of ImageJ did you try? The one bundled with Java
1.3.1 or the one with Java 5.0? The one with the newer version of Java
is more likely to work on Windows XP x64.
-wayne
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Scantron analysis
Hi all.
I'm very new to ImageJ.
I'm trying to use ImageJ to analyze a scantron-like fill-in-the-bubble
questionnaire. I've gotten the bubbles circled using 'analyze
particles', but how do I tell ImageJ to measure how filled-in the
particles are and dump the result to a spreadsheet?
Thanks!
Test image: http://www.pkts.ca/bubbles.gif
--
CH <chnih@xxxxxxx>
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Filter linked cells from alone cells
Dear ImageJ Community,
Sorry for this new-bye question.
On a image I have 2 types of cells grouped cells attached together
and alone cells.
Does anyone know how to filter grouped cells from alone cells?
After a Threshold of my image the quality is not good enough to keep
all the link between the cells so I get a lot of wrong isolated cells
after a Analyse particle setting a min and max.
Any clue?
Thanks a lot
Paul A
Next Message by Thread:
click to view message preview
Scantron analysis
Hi all.
I'm very new to ImageJ.
I'm trying to use ImageJ to analyze a scantron-like fill-in-the-bubble
questionnaire. I've gotten the bubbles circled using 'analyze
particles', but how do I tell ImageJ to measure how filled-in the
particles are and dump the result to a spreadsheet?
Thanks!
Test image: http://www.pkts.ca/bubbles.gif
--
CH <chnih@xxxxxxx>