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Re: particle analysis-Feret diameter: msg#00184java.imagej
On Sunday 27 November 2005 08:57, K. Kachrimanis wrote: > If this is the maximum Feret and it is selected from all Ferets measured, > then the only thing missing is to report the minimum and a mean Feret also. My plugin Particles8_Plus at http://www.dentistry.bham.ac.uk/landinig/software/software.html does most of the descriptors mentioned and includes the angle of the maximum feret diameter. It also calculates the Breadth, which I think is a better parameter than the minimum feret, but it uses a different way to estimate perimeter (it uses Freeman's algorithm) so sometimes the results are not exactly the same as the built-in analyser. How do you propose to place the other feret diameters at n angles? Is this based on the image frame of reference or angles offset from the direction of the largest one? And what should one use, the centroid or the centre of mass of the particle? Note that when using the centre of mass, holes in the particle make it difficult to standardise the measurements (the same particle filled and with holes has different feret legths because the "centre" is in a different location. > a "microshape" descriptor is also available (fractal dimension), Fractal dimension is not a microshape descriptor, but a global one which has no scale (and therefore is not micro, meso or macro). However I have been always suspicious of other commercial programs that "estimate" the f dim of particles, for two reasons: 1."particles" I guess are image objects that are most of the time not large enough to satisfy the requirement of an order of magnitude in the range of scales analysed. 2. fractal dimension is a bit of a statistical measure, it depends of a goodness of fit to a particular model, so the "goodness" of the result needs to be monitored by some other means (for instance the r-squared of a log-log plot linear fit). When particles are all different sizes, these goodness of fit are not comparable (it is not the same to look at a 30 pixel particle than to a 30000 pixel one, in the latter there will be much larger scales that are not present in the former, and so one is not measuring the same property unless we already know that the objects are strictly fractal). I do not think that it is a good idea to do this blindly. I think that if f dim is incorporated in the Particle Analyzer, it is going to be misused extensively. If there were a vote I would go for "no". Cheers, Gabriel
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